Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEG-------LF-------AQVG-RD-MNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETVKNFGSMQVESFGVSHDAI-------------EPMFYIFHK-GNKKFVMITDTGYVSDRMKGHI--AGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI |
| 3RPC Chain:A ((3-263)) | ------------AMTQYTHIR----NATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSIPKSLPIFVQNTADKELITSQGFI---D--VRIIFESLEFNGITLRKTGGSHGTVEMYANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSD-VEKALLRFDPNVIIMNTGYAQIL-------------GFEDSIIMGTKDIGRMVVRK---PEAKIIAVHMDTVNHTA-TSRKDVRKFIKGNNIE----SHVAVPEDGETIT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75289 for 1901 contacts (-39.6/contact) +
2D Compatibility (PS) -24312 + (NN) -5634 + (LL) 2636
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -113199.0 ( -59.55 by residue)
QMean score : 0.365
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