Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKV--PYNKEYKNLDTGKFC
1JLT Chain:B ((1-115))
----------------------NLFQFAKMINGKL-GAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRV---RGC-----NPKLAIYSYSFKKGNIVCG-KNNGCLRDICECDRVAANCFHQNKNTYNKNYKFLSSS-RC
General information:
TITO was launched using:
RESULT:
Template:
1JLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61643 for 830 contacts (-74.3/contact) +
2D Compatibility (PS) -12244 + (NN) -9997 + (LL) 3096
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -93138.0 ( -112.21 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_1JLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLT-query.scw
PDB file :
Tito_Scwrl_1JLT.pdb
: