Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLVLAVLLTVGAAQEGISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKA--PYNKEHKNLDTKKYC
2G58 Chain:A ((1-115))
----------------------SLLEFGKMILEET-GKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNL---PDC-----NPKSDRYKYKRVNGAIVCE-KGTSCENRICECDKAAAICFRQNLNTYSKKYMLYPDF-LC
General information:
TITO was launched using:
RESULT:
Template:
2G58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64036 for 833 contacts (-76.9/contact) +
2D Compatibility (PS) -12292 + (NN) -9896 + (LL) 2840
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -95384.0 ( -114.51 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2G58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G58-query.scw
PDB file :
Tito_Scwrl_2G58.pdb
: