Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALLARLLLCVLVVSDSKGSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCADGKKPSSPPEELKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWG--RGCALKDKPGVYTRVSHFLPWIRSHTKEENGLAL |
1BRU Chain:P ((1-240)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVGGEDARPNSWPWQVSLQYDSS-GQWRHTCGGTLVDQSWVLTAAHCISS---SRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASP----VSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG-ASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGD-GIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIAN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162401 for 2016 contacts (-80.6/contact) +
2D Compatibility (PS) -25514 + (NN) -12822 + (LL) 8552
1D Compatibility (HY) -17600 + (ID) 4200
Total energy: -213985.0 ( -106.14 by residue)
QMean score : 0.371
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