Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAPGLAQAAAAESDSRKVAEETPDGAPALCPSPEALSPEPPVYSLQDFDTLATVGTGTFGRVHLVKEKTAKHFFALKVMSIPDVIRLKQEQHVHNEKSVLKEVSHPFLIRLFWTWHDERFLYMLMEYVPGGELFSYLRNRGRFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRDGHIKLTDFGFAKKLVDRTWTLC----GTPEYLAPEVIQSKG----HGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGK--IDFPRHLDF--HVKDLIKKLLVVDRTRRLGNMKNGANDVKHHRWFRSVDWEAVPQRKLKPPIVPKIAGDGDTSNFETYPENDWDTAA-PVPQKDLEIFKNF |
| 2F2U Chain:A ((75-386)) | ----------------------------------------------EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFL-TDREVRLG--RNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIE-----VETFPIPK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158342 for 2289 contacts (-69.2/contact) +
2D Compatibility (PS) -31029 + (NN) -14293 + (LL) 3256
1D Compatibility (HY) -30800 + (ID) 5550
Total energy: -236758.0 ( -103.43 by residue)
QMean score : 0.440
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