Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQIEFKNVSKVY-PNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYN----QRSDELSGGQQQRISIARALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASE---ATDDVFSEIYGRTIKEDEKLGVN |
| 2FFA Chain:A ((8-242)) | ---ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWL---RRQVGVVLQDNVLLNR-SIIDNISLANPGMS-----VEKVIYAAKLAGAHDFISELR--EGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK--GRTVIIIAARLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYSYLY------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99161 for 1778 contacts (-55.8/contact) +
2D Compatibility (PS) -23957 + (NN) -2611 + (LL) 2412
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -144817.0 ( -81.45 by residue)
QMean score : 0.508
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