Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLPQNFMWGGALAANQFEGGYEKGGKGLSVIDVMTSGAHGKARQITESIDLNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVVFERYKDKVTYWMTFNEINNQMDTS------NPIFLWTNSGVALTENDNPEEVLYQVAHHELLASALAVRLGK---EINPKFKIGTMISHVPIYPY--SCHPKDMMEAQIANRLRFFFPDVQVRGYYPSYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKH-DVDTTVENNIVNGGLNHSVENPHIATSDWG------WA-IDPDGLRYTLNVLYDRY-QLPLFIVENGFGAV--DEVVDGHIHDDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGHGTMERLKKDSFYWYQQVIASNGDKL |
| 3AIR Chain:A ((76-540)) | -----KDFLFGASTSAYQIEGAWNEDGKGPSTWDHF---CHTYPERISDMTN------GDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTGKV-NQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREP-YTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPV-VRGDYPFSMRSLIGDR-LPMFTKEEQEKLAS--SCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQ-GADVRGHFTWGLIDNFEWSLG-YSSRFGLVYIDK-NDGN---KRKLKKSAKWFSK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256517 for 3931 contacts (-65.3/contact) +
2D Compatibility (PS) -46491 + (NN) -9492 + (LL) 792
1D Compatibility (HY) -28400 + (ID) 7600
Total energy: -347708.0 ( -88.45 by residue)
QMean score : 0.514
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