Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMG-GLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVD--ELHGTLNRFYC--NACHK----SYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK-GDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4RMJ Chain:B ((22-238)) | ------------ERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALA-KELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82883 for 1562 contacts (-53.1/contact) +
2D Compatibility (PS) -21888 + (NN) -4160 + (LL) 2984
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -125147.0 ( -80.12 by residue)
QMean score : 0.414
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