Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVLGSTGSIGKNALKIAKKFGVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNLEPLGAEVFVGLDGIDAMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLL----DISQITPVDSEHFGLWALLQNKTLKP-KSLIISASGGAFRD-TPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASL-KIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAIN-PKLASLSASIKPLDLYALSAIKFEPISVERYTLWRY-KDLLLENPKLGVVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFKLSSLDEVLALDKEVRERFGSVARV |
| 4OOF Chain:B ((29-395)) | VVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPGQIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQ-AGAHPTFSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAA--CDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVDDVLDAQRWARERAQRAVSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180081 for 3178 contacts (-56.7/contact) +
2D Compatibility (PS) -36954 + (NN) -3118 + (LL) -156
1D Compatibility (HY) -19600 + (ID) 6250
Total energy: -246159.0 ( -77.46 by residue)
QMean score : 0.362
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