Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3F0G Chain:D ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR
General information:
TITO was launched using:
RESULT:
Template:
3F0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108609 for 1320 contacts (-82.3/contact) +
2D Compatibility (PS) -17237 + (NN) -10251 + (LL) 208
1D Compatibility (HY) -12400 + (ID) 4550
Total energy: -152839.0 ( -115.79 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3F0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0G-query.scw
PDB file :
Tito_Scwrl_3F0G.pdb
: