Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3NV7 Chain:A ((3-157))
---KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA--
General information:
TITO was launched using:
RESULT:
Template:
3NV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87183 for 962 contacts (-90.6/contact) +
2D Compatibility (PS) -16772 + (NN) -6543 + (LL) 156
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -129092.0 ( -134.19 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_3NV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV7-query.scw
PDB file :
Tito_Scwrl_3NV7.pdb
: