Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIKNIQKSFGENK--VLKGIDLTVKKGEVVTILGPSGSGKTTFLRCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQQYNLFSHKTVIQNVM---EGLTVARKI-PKKIA--HEIAERELTKVGLADKLSAYPSQLSGGQKQRVGIARALAINPDVILFDEPTAALDPELVGEVLEVMLEIARAGATMIVVTHEMEFAKRVADQVVFMDGGLIVEQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI |
| 2FGK Chain:B ((8-247)) | -ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN-----WLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFIS-ELRE-GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICK-GRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELL--SEPESLYSYLYQLQSD-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106672 for 1790 contacts (-59.6/contact) +
2D Compatibility (PS) -23804 + (NN) -1974 + (LL) 3248
1D Compatibility (HY) -22000 + (ID) 4050
Total energy: -155252.0 ( -86.73 by residue)
QMean score : 0.446
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