Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSMSLNEGAIIPWRPISSQYYPQMLASACKEFGIDMDTPLEKLSKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLSVKVNDHHIGQISEFSINEALAFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMM-AADYLIDIGPGAGEHGGRIVAAGTPEEVANNKNSITGDYLSGKK------FIPV---PAKRRKGNGLELEIIGAKA----NNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYFTNQ--PRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIK-QADYLIDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK |
| 3BK7 Chain:A ((211-546)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVKELELENV-LDRELHQLSGGELQRVAIAAALLRKAH--FYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGIN----EFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGV---------------EEPTEGK------VEWDLT-V---------A----------------------YKPQYI------------------------------------------------------KAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDL-YDRNVEDLSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFE---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76259 for 2363 contacts (-32.3/contact) +
2D Compatibility (PS) -34862 + (NN) -8442 + (LL) 37704
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -104209.0 ( -44.10 by residue)
QMean score : 0.383
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