Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLMMKNITKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTKVRLDKVGFIFQGANLIPYL-NVRDQL-LVIAELSGDKGRVAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMNDPDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVTHD-ERVLDLVDRVIRIEDGYLKD
4ZIR Chain:A ((24-215))
---------------------LENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGD------VLYDGE--KGYEIRRN-IGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLD-REGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKG----
General information:
TITO was launched using:
RESULT:
Template:
4ZIR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61243 for 1426 contacts (-42.9/contact) +
2D Compatibility (PS) -20587 + (NN) -7268 + (LL) 2728
1D Compatibility (HY) -14800 + (ID) 3350
Total energy: -104520.0 ( -73.30 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_4ZIR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZIR-query.scw
PDB file :
Tito_Scwrl_4ZIR.pdb
: