Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVS-GDPEVRQLILLDAPVVLGWAGFR--DVAQRYSLGMTEQLITEAIRAGQLAR-QPVRPLAQVLIGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG
4W97 Chain:A ((4-196))
-------VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDS--TANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGG-PLTAQQVGQQYLAIVLGGIT--
General information:
TITO was launched using:
RESULT:
Template:
4W97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75500 for 1367 contacts (-55.2/contact) +
2D Compatibility (PS) -20372 + (NN) -9152 + (LL) 304
1D Compatibility (HY) -10000 + (ID) 1650
Total energy: -116370.0 ( -85.13 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4W97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W97-query.scw
PDB file :
Tito_Scwrl_4W97.pdb
: