Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTT-FPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAG-NGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
3A76 Chain:A ((21-167))
--MSDLDRLASRAAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVLWPMFHECIHYGTNLRLEFVSADKVNGIGDVLLLGNLVEGNQSILIAAVFTDEYERRDGVWKFSKRNACTNYFTPLAGI--------------------HFAPP
General information:
TITO was launched using:
RESULT:
Template:
3A76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47414 for 1032 contacts (-45.9/contact) +
2D Compatibility (PS) -15958 + (NN) -8736 + (LL) 1960
1D Compatibility (HY) 2000 + (ID) 950
Total energy: -69098.0 ( -66.96 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3A76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A76-query.scw
PDB file :
Tito_Scwrl_3A76.pdb
: