Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIAESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
4HXX Chain:A ((42-292))
------LKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRP-LQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQA------NGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILT--
General information:
TITO was launched using:
RESULT:
Template:
4HXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130756 for 2210 contacts (-59.2/contact) +
2D Compatibility (PS) -27880 + (NN) -13371 + (LL) 1228
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -189979.0 ( -85.96 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_4HXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HXX-query.scw
PDB file :
Tito_Scwrl_4HXX.pdb
: