Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELP-GFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPEL-AEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVE-AEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMR-RTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV---VATEEPARLLSQFIHGIKTLPVTWS |
3A4G Chain:A ((25-397)) | -----------------------------------------AYAALRAEDPVR---KLALPDGPV-----WLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGP---VDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLV---DDSPADDKNAAM---GKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQR-KLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASGGV-FFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185036 for 2918 contacts (-63.4/contact) +
2D Compatibility (PS) -38610 + (NN) -13991 + (LL) 1644
1D Compatibility (HY) -26000 + (ID) 6700
Total energy: -268693.0 ( -92.08 by residue)
QMean score : 0.456
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