Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHG----STFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADL------IGDGAVALRGLGWWADVDI-------ERALAIGTDMSMRLADRGVLLKDT----YGAALRFAPPLVITAQEIDCAVRRFADALWEAGS
1Z3Z Chain:A ((238-430))
LILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAH--ELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGD----VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA--
General information:
TITO was launched using:
RESULT:
Template:
1Z3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114472 for 1239 contacts (-92.4/contact) +
2D Compatibility (PS) -18235 + (NN) -3045 + (LL) -60
1D Compatibility (HY) -12000 + (ID) 3350
Total energy: -151162.0 ( -122.00 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3Z-query.scw
PDB file :
Tito_Scwrl_1Z3Z.pdb
: