Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
3LQG Chain:A ((248-282))
VLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3LQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8806 for 159 contacts (-55.4/contact) +
2D Compatibility (PS) -3778 + (NN) -1043 + (LL) 1352
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -17675.0 ( -111.16 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_3LQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LQG-query.scw
PDB file :
Tito_Scwrl_3LQG.pdb
: