Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
5EYR Chain:A ((26-218))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
5EYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100919 for 1381 contacts (-73.1/contact) +
2D Compatibility (PS) -21219 + (NN) -17122 + (LL) 1092
1D Compatibility (HY) -24800 + (ID) 9650
Total energy: -172618.0 ( -124.99 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_5EYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EYR-query.scw
PDB file :
Tito_Scwrl_5EYR.pdb
: