Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------MDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEE--GLP-IEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAELQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCG--AESGGLEEHLHGQLPPRCAACG-----GVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTASFPYIVEPVLRTRQAGGFTAEVN---PGVTDLSERV-----DVKMTGRALDIMPQVVSHIYR----------------------------------- |
| 5BTR Chain:A ((4-390)) | DNLLFGDEIITNGSDWTPRPRIGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINILSEPPKRKKRKDINTIEDAVKLLQESKKIIVLTGAGVSVSSGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKEIYPG--QFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG--IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLP-EQFHRAMKYDKDEVDLLIVIGSS----------LKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELLGDCDVIINELCHRLGGEYAKLSSNPVKLSEITEQYLFLPPNRYIFHGAEVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136370 for 1952 contacts (-69.9/contact) +
2D Compatibility (PS) -25883 + (NN) -10917 + (LL) 920
1D Compatibility (HY) -17600 + (ID) 3250
Total energy: -193100.0 ( -98.92 by residue)
QMean score : 0.514
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