Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGF-LTGKRALIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLRGRVEEFASGWGSRPELCFPCDVADDSQIEAVFAALGKHWDGLDIIVHSVGFAPGDQLDGDFTAVTTREGFRIAHDISAYSFIALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTPLRRNVTIEEVGNAGAFLCSDLASGISGEILYVDGGFNTTAMGPLDDD
3OIG Chain:A ((1-257))
MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLN-TNRDGFLLAHNISSYSLTAVVKAARPMMT-EGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARLE----
General information:
TITO was launched using:
RESULT:
Template:
3OIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183760 for 2206 contacts (-83.3/contact) +
2D Compatibility (PS) -28191 + (NN) -13783 + (LL) 92
1D Compatibility (HY) -26400 + (ID) 6350
Total energy: -258392.0 ( -117.13 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_3OIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OIG-query.scw
PDB file :
Tito_Scwrl_3OIG.pdb
: