Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKSAEEIQRMSVAGALTAKVLEALDEVVRPGISTAEIDRFCERYIVDTLAAIPGSKGQYGYPFTVNTSVNEVVCHGWPSAQQILRDGDIVNVDVTVIKDGYFGDSSKMYRVGAIDRQAQKLLDVTRECLYRAIRVVRPDATLGDIGHAIQSHAEANGYSVVREYCGHGIGRKMHEAPQVLHFGRAGAGARLKAGMTFTIEPMINQGGHAVKLHKDGWTVTTRDRRLSAQYEHTVLVTERGCRVLTLRDEEREALADLAG
3IU7 Chain:A ((44-286))
-VQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDN-GAYPSTLGYKGFPKSCCTSLNEVICHGIPDST-VITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT--------------
General information:
TITO was launched using:
RESULT:
Template:
3IU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129664 for 2154 contacts (-60.2/contact) +
2D Compatibility (PS) -27048 + (NN) -12946 + (LL) 1652
1D Compatibility (HY) -20400 + (ID) 5300
Total energy: -193706.0 ( -89.93 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3IU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IU7-query.scw
PDB file :
Tito_Scwrl_3IU7.pdb
: