Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2BV4 Chain:A ((1-113))
-AQQGVFTLPARINFGVTVLVNSAATQHVEIFVDNEPRAAFSGVGTGDNNLGTKVINSGS-GNVRVQITANGRQSDLVSSQLVLANKLNLAVVGSEDGTDMDYNDSIVILNWPLG
General information:
TITO was launched using:
RESULT:
Template:
2BV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37909 for 829 contacts (-45.7/contact) +
2D Compatibility (PS) -12955 + (NN) -11367 + (LL) 180
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -77901.0 ( -93.97 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_2BV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BV4-query.scw
PDB file :
Tito_Scwrl_2BV4.pdb
: