Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPQYPTRLPCG-SRVLDLARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMRGEPQTMQDAPAYQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFG---FAKTLEHNLVLFRHLQALHGLGLPLLVGVSRKSMIGKVLGREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD
3TR9 Chain:A ((12-293))------SFHLRLRDDKRIVFSEPAVMGIINVSPNSFYHPH--LDLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGS-TTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRSVD


General information:
TITO was launched using:
RESULT:

Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181178 for 2346 contacts (-77.2/contact) +
2D Compatibility (PS) -30077 + (NN) -18556 + (LL) 608
1D Compatibility (HY) -21600 + (ID) 5700
Total energy: -256503.0 ( -109.34 by residue)
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3TR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TR9-query.scw
PDB file : Tito_Scwrl_3TR9.pdb: