Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
2J9E Chain:A ((3-114))
MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERY----YIVDLIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKEEGKEAL
General information:
TITO was launched using:
RESULT:
Template:
2J9E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55225 for 688 contacts (-80.3/contact) +
2D Compatibility (PS) -11678 + (NN) -759 + (LL) 176
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -80936.0 ( -117.64 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2J9E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9E-query.scw
PDB file :
Tito_Scwrl_2J9E.pdb
: