Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HAAFTVAHEIGHLLGLSHDDSKFCEENFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQIPGPEELPGQTYDASQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSTSSHGNWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPKNNGRYCTGK
2RJQ Chain:A ((142-294))
HAAFTVAHEIGHLLGLSHDDSKFCEETFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQILGPEELPGQTYDATQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVD------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57297 for 995 contacts (-57.6/contact) +
2D Compatibility (PS) -16731 + (NN) -9452 + (LL) 416
1D Compatibility (HY) -20800 + (ID) 7500
Total energy: -111364.0 ( -111.92 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_2RJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RJQ-query.scw
PDB file :
Tito_Scwrl_2RJQ.pdb
: