Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAERRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTF--RYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEIAPLEPDAPPDACE--ASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVDAAFED-AQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVR-FPVHAALVWGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRA-TDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL |
| 4FVL Chain:A ((9-349)) | -------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG---------------PGDEDPNPKHP----KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAEL-FLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYE-KNGYIYFFNGPIQFEY------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204342 for 2554 contacts (-80.0/contact) +
2D Compatibility (PS) -35915 + (NN) -25552 + (LL) 6376
1D Compatibility (HY) -29600 + (ID) 6800
Total energy: -295833.0 ( -115.83 by residue)
QMean score : 0.407
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