Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETQLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLTGAVALGALVTVGAFFASK
1ZY3 Chain:A ((1-170))
-ATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEVLVGQVQEWMVAYLETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVR----------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50350 for 1033 contacts (-48.7/contact) +
2D Compatibility (PS) -18241 + (NN) -8771 + (LL) 2164
1D Compatibility (HY) -20400 + (ID) 8400
Total energy: -103998.0 ( -100.68 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_1ZY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZY3-query.scw
PDB file :
Tito_Scwrl_1ZY3.pdb
: