Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSTIPVLGTELTPINGREETPCYKQTLSFTGLTCIVS-----LVALTGNA-VVLWLLGCRMRRNAVSIYILNLVAADFLFLSGHIICSPLRLIN--IRHPISKILSPVMTFPYFIGLSMLSAISTERCLSILWPIWYHCRR----PRYLSSVMCVLLWALSLLRSILEWMFCDFLFSGANSVWC-------------------ETSDFITIAWLVFLCVVLCGSSLVLLVRILCGSRKMPLTRLYVTILLTVLVFLLCGLPFG-------------IQWALFSRIHLDWKVLFCHVHLVSIFLSALNSSANPIIYFFVG-SFRQRQNRQNLKLVLQRALQDTPEVDEGGGWLPQETLELSGSRLEQ |
| 2LNL Chain:A ((29-314)) | ---------------------PCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIV-----HATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCY---GFTLRTLFKAHMGQKH----RAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEI------LGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209895 for 1722 contacts (-121.9/contact) +
2D Compatibility (PS) -23805 + (NN) -2257 + (LL) 4716
1D Compatibility (HY) -25200 + (ID) 3800
Total energy: -260241.0 ( -151.13 by residue)
QMean score : 0.176
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