Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLWLLGYRMRR-NAVSIYILNLAAADFLFLSFQIIRLPLRLINIS----HLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLS-------LLFSMLEWR-----FC------DFLFSGADSSWCETSD-FIPVAWLIFLCVVLCVSSLVL---------------------------------LVRILCGSRKM-------PLTRLYVTILLTVL-VFLLCGLPFGILGALIYRMHL--------NLEVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 4XNV Chain:A ((38-382)) | ------SFKCALTKTG--------FQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPK-SLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226081 for 1893 contacts (-119.4/contact) +
2D Compatibility (PS) -26617 + (NN) -2822 + (LL) 2372
1D Compatibility (HY) -27200 + (ID) 3800
Total energy: -284148.0 ( -150.10 by residue)
QMean score : 0.167
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