Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------MELRNSTLGSGFILVGI-LNDSGSPELLYATFTILYMLALTSNGLLLLAITIEARLHMPMYLLLGQLSLMDLLFTSVVTPKALADFLRRENTISFGGCALQMFLALTMGSAEDLLLAFMAYDRYVAICHPLKYMTLMSPRVCWIMVATSWILASLIAIGHTMYTMHLPFCVSWEIRHLLCEIPPLLKLAC--------ADTSRYELIIYVTGVTFLLLPISAIVASYTLVLFTVLRMPS------NEGRKKALVTCSSHLIVVGMFYGAATFMYVLPSSFHS-----PKQDNIISVFYTIVTPALNPLIYSLRNKEVMRALRRVL---------GKYILLAHSTL------- |
1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACA---------APPLVGWS-RY----IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHF-IIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232248 for 2401 contacts (-96.7/contact) +
2D Compatibility (PS) -30854 + (NN) -912 + (LL) 1800
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -265664.0 ( -110.65 by residue)
QMean score : 0.225
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