Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTEFIFLGLSDSQELQTFLFMLFFVFYGGIVFGNLLIVITVVSDSHLHSPMYFLLANLSLIDLSLSSVTAPKMITDFFSQRKVISFKGCLVQIFLLHFFGGSEMVILIAMGFDRYIAICKPLHYTTIMCGNACVGIMAVAWGIGFLHSVSQLAFAVHL-PFCGPNEVDSFYCDLPRVIK-------LAC--TDTYRLDIMVIANSGVLTVCSFVLLIISYTIIL---------MTIQHCPLDKSSK-------------------ALSTLTAHITVVLLFFGP-CVFIYAWPFPIKSLDKFLAVFYSVITPLLNPIIYTLRNKDMKTAIRRLRKWDAHSSVKF |
| 4UHR Chain:A ((21-302)) | -------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---------VLSFAIGLTPMLGWNN-----CGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLM-------YLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204506 for 1768 contacts (-115.7/contact) +
2D Compatibility (PS) -24561 + (NN) -5748 + (LL) 4180
1D Compatibility (HY) -27600 + (ID) 3550
Total energy: -261785.0 ( -148.07 by residue)
QMean score : 0.182
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