Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETQNLTVVTEFILLGLTQSQDAQLLVFVLVLIFYLIILPGNFLIIFTIKSDPGLTAPLYFFLGNLALLDASYSFIVVPRMLVDFLSEKKVISYRSCITQLFFLHFLGAGEMFLLVVMAFDRYIAICRPLHYSTIMNPRACYALSLVLWLGGFIHSIVQVALILHLPF-CGPNQLDNFFCDVPQVIKLAC------------TNTFVVELLMVSNSGLLSLLCFLGLLASYAVILCRIREHSSEGKSKAISTCTTHIIIIFLMF--------GPAIFIYTCPFQAF-PADKVVSLFHTVIFPLMNPVIYTLRNQEVKASMRKLLSQHMFC
3C9M Chain:A ((36-317))--------------------QFSMLAAYMFLLI--MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP


General information:
TITO was launched using:
RESULT:

Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -251422 for 2024 contacts (-124.2/contact) +
2D Compatibility (PS) -26031 + (NN) -3541 + (LL) 3904
1D Compatibility (HY) -23200 + (ID) 3500
Total energy: -303790.0 ( -150.09 by residue)
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_3C9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C9M-query.scw
PDB file : Tito_Scwrl_3C9M.pdb: