Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKNQTEVMREFFLSGFSQTPSIEAGLFVLFLFFYMSIWVGNVLIMVTVASDKYLNSSPMYFLLGNLSFLDLCYSTVT-TPKLLADFFNHEKLISYDQCIVQLFFLHFVGAAEMFLLTVMAYDRYVAICRPLHYTTVMSRGLCCVLVAASWMGGFVHSTVQTILTVHLPFCGPNQVENFFCDVPPVIKLACADTFVIELLMVSNSGLISTISFVVLISSYTTILV--KIRSKE---------------------GRRKALSTCASHLMVVTLFFGPCIFIYARPFST---F--SVDKMVSVLYNVITPMLNPLIYTLRNKEVKSAMQKLWVRNGLTWKKQET |
2Z73 Chain:A ((33-333)) | ----------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQ-TPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTL----EGVLCNCSFDYISR-----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241950 for 2240 contacts (-108.0/contact) +
2D Compatibility (PS) -27620 + (NN) -7717 + (LL) 1424
1D Compatibility (HY) -17200 + (ID) 2050
Total energy: -295113.0 ( -131.75 by residue)
QMean score : 0.278
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