Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITFLPIIFSSLVVVTFVIGNFANGFIALVNSIEWFKRQKISFADQILTALAVSRVGLLWVL-LLNWYSTVLNPA-FNSVEVRTTAYNIWAVINHFSNWLATTLSIFYLLKIANFSNFIFLHLKRRVKSVILVMLLGPLLFLACHLFVINMNEIVRTKEFEGNMTWKIKLK---SAMYFSNMTVTMVANLVPFTLTLLSFMLLICSLCKHLKKMQLHGK-------GSQDPSTKVHIKALQTVISFLLLCAIYFLSIMISVWSFG----SLENKPVFMFCKAIRFSYPSIHPFILIWGNKKLKQTFLSVFWQMRYWVKGEKTSSP |
2Z73 Chain:A ((33-336)) | ----VYYSLGIFIGICGIIGCGGNGIVIYLFTKTK---SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMAA-SKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAY-TLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221528 for 2329 contacts (-95.1/contact) +
2D Compatibility (PS) -29290 + (NN) -7306 + (LL) 1012
1D Compatibility (HY) -10400 + (ID) 1450
Total energy: -268962.0 ( -115.48 by residue)
QMean score : 0.272
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