Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLLCVI-LLDCFILVLYPDVYATGKEMRIIDFFWTLTNHLSIWFATCLSIYYFFKIGNFFHPLFLWMKWRIDRVISWILLGCVVLSVFISLPATENLNADFRFCVKAKRKTNLTWS-CRV-NKTQHASTKLFLNLATLLPFCVCLMSFFLLILSLRRHIRRMQLSA-------TGCRDPSTEAHVRALKAVISFLLLFIAYYLSFLIATSSYFM----PETELAVIFGESIALIYPSSHSFILILGNNKLRHASLKVIWKVMSILKGRKFQQHKQI |
| 2Z73 Chain:A ((32-335)) | ---AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKS---LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMA-ASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWG--A---YTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274006 for 2359 contacts (-116.2/contact) +
2D Compatibility (PS) -29687 + (NN) -7789 + (LL) 1220
1D Compatibility (HY) -16400 + (ID) 2150
Total energy: -328812.0 ( -139.39 by residue)
QMean score : 0.291
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