Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCGQVTSSLFSCLPYLRNTGPLGDCCSGVKKLKGQAQTTADRQTACNCLKSTAGSIKGLNFGKAASLPSTCSVNIPYEISPSTDCSKVQ
1T12 Chain:A ((1-91))
AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51855 for 683 contacts (-75.9/contact) +
2D Compatibility (PS) -9144 + (NN) -2226 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -77025.0 ( -112.77 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: