Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDITPLVSKSKNFINGYSEGKFLVNDQEYHSSIIIFPEKVIKLKESGIN-SKEHFKSFL--TEEIEILLIGTGKTRNIPNSSVKSYLIEQKGLNFEFMTTDAACRTHNVLISEDRFVVTYLKII-
2FI9 Chain:A ((11-128))
------HFPGRAPIDAYGNGGFRFADMSHRGSIICIPSGIYGIDMTGPVPTQEDISRVLEESDQIEVLLIGTGVELLRLPEELRVLLWE-KRISSDTMSTGAAVRTFNVLLAEDRAVAALLFAVE
General information:
TITO was launched using:
RESULT:
Template:
2FI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81941 for 886 contacts (-92.5/contact) +
2D Compatibility (PS) -12527 + (NN) -4458 + (LL) 544
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -109032.0 ( -123.06 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2FI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FI9-query.scw
PDB file :
Tito_Scwrl_2FI9.pdb
: