Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSP-QVVLLSPAESKDVYFAEFGWLDPNGKTKVPDS-KTFWQAEK-----TELTNQKAVNLFWNNENGIVFRMKVSLD-NNYMFKVEQIVENNTKDNVVLVPYGKINRK----RDNINESYWISHEGILGAF---DNKLEEWTYKNVAKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKNILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 3WVF Chain:A ((56-528)) | ----------------------------------------------------------------GQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSP---QFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLP-----------HTFRGAAYSTPDEKYEKYKFDTIADNENLNIS-SKGGWVAMLQQYFATAWIPHN-DGTNNFYTANLGNGIAA--IGYKSQPVLVQPGQTGAMNSTLWVGPEIQD-----KMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY-----------------ILPILMGVTMFFIQ---------------KIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193287 for 3375 contacts (-57.3/contact) +
2D Compatibility (PS) -45655 + (NN) -10824 + (LL) 10436
1D Compatibility (HY) -39600 + (ID) 6700
Total energy: -285630.0 ( -84.63 by residue)
QMean score : 0.328
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