Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFNQHVEANALKVLDTTVNISKLVSFLQSNKHIVKLSLKYVRIDDEDAKELAKLTHLAALDLSMNRIGYKRNRGFS
3W3J Chain:B ((509-542))
--------------------------------HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTH
General information:
TITO was launched using:
RESULT:
Template:
3W3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12427 for 159 contacts (-78.2/contact) +
2D Compatibility (PS) -3119 + (NN) 3747 + (LL) 2564
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -12735.0 ( -80.09 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_3W3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W3J-query.scw
PDB file :
Tito_Scwrl_3W3J.pdb
: