Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYAALDTYLEPLQGIFQEEGVNEISINKPKEVWIENRSEIRCEKLEIFDLNHLKSLGRLIAQATEQKLSEEAPLLSATLPNGYRIQIVFPPACEPDKVVMSIRKPSGLQLALDDYEKMGAFSETAIE-VIDSPVNRHLNLLLKQKKIKEFLEYAVMNKKNIIISGGTSTGKTTFTNATLRAIPAEERIITVEDAREIVLNDHPNRVHLIASKGGQGRAKVTTQDLIEACLRLRPDRIIVGELRGAEAFSFLRAINTGHPGSISTLHADSPTMALEQIKLMVMQA--NLGIPPDQIIPYIRNVIDIVIQLKRTS-G-GKRSVSEILFTKSSMKMLKFTHN |
| 2GZA Chain:A ((22-349)) | -----VNFHLEPLRPWLDDPQITEVCVNRPGEVFCERASAWEYYAVPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGERIQIVRPPACEHGTISVTIRKPSFTRRTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYP--------VTAATLLRSCLRMKPTRILLAELRGGEAYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEVWYDPNTKRAL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211580 for 2464 contacts (-85.9/contact) +
2D Compatibility (PS) -34280 + (NN) -21942 + (LL) 1204
1D Compatibility (HY) -28000 + (ID) 5750
Total energy: -300348.0 ( -121.89 by residue)
QMean score : 0.536
|
|
|