Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MPARVNAIANTQ----EPSKVKKVLLAPV-RWL-----AVGLIIASVIV-----------FVISLLVLFVIVTIL-RKLYCLAGGKLPEWLEQRAAAFEEIIH------VPQTT----HNTDINDAININIKKLKE----NYGE----------PDIEDGFTKEI----------ENFINKLKCITNDTEKAADKYQ---------------------LKEDEKKHALECLERIQNNP-------------------DIHSGSGLTL---KQVLNLVWKACNDKGKKSAGSNIDIDTRMLQRKYQLVQHLIESQTEYG-VYGDHGSSACFTGTFN-SIVSSLYIFEEFSFLQRVNKDNIKQEFEDELQ-TKGEELFNQLSNK------------EKEEVAKALSSA--PSTRFFSDYVESFKNH---------------------------------PARAVLGDKECNELVRAHLYNLQYNEVISNFSKQ------------------- |
| 5BP8 Chain:A ((6-520)) | APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPGKLGAWSGTTLTSPAPDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPAAPGVAYLRDVQARFGGPVPSITPIVYFEQAWVLNSLAASGLRYEAPAALLDSLEAGLTDEGIAAAPGLPSDSDDTAAVLFALAQHGRTHRPDSLMHFRRDGYFSCFGVERTPSTSTNAHILEALGHHVTV-RPDDAGRYGAEIRMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRADGSWGRWQGTTEETAYMVQLLMRTRTPGSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -18663 for 2305 contacts (-8.1/contact) +
2D Compatibility (PS) -35704 + (NN) -14183 + (LL) -80
1D Compatibility (HY) 9600 + (ID) 1950
Total energy: -60980.0 ( -26.46 by residue)
QMean score : 0.263
|
|
|