Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSASVMDEQNVTLMFQDDSIEHKLEEAVNFVENKVISSDGLTLAEVFQALVQMLNNDLELVKKVLAHANIMAKHGMKLAKESQLSKADVCR-----ALEGK-----ESILHRQDFIKKLSSLPSVKSIKKKGRGL
1GUL Chain:A ((129-201))
-------------------------------------------------------------IIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKK
General information:
TITO was launched using:
RESULT:
Template:
1GUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2688 for 335 contacts (-8.0/contact) +
2D Compatibility (PS) -6533 + (NN) -1756 + (LL) 5020
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -11757.0 ( -35.10 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1GUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GUL-query.scw
PDB file :
Tito_Scwrl_1GUL.pdb
: