Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAALYHKEYGYYMNKLPLGNGGDFITAPEISQLFGEIIAVWVMHTWKKLGKPSKFSLVELGPGRGTLIHDIIRVTKKYGSFFSSMAIHLVEISPTLQKIQKEKLKG-LEISWHENIDSLPEQPTIFLANEFFDALPIDQFVYRNGKWHENRVTKQNDGASSQCPFLVTPLLNTRIQKKDPSKLALKSRKKNVVTSLSLSCHPSAPSFLSHCLTLGSRKIDRKQAHYSTFSMKLQKNWIPVSSNGMTEGFDGAVVEVCSAGIEVLKKLEDKIMNNGGAALIIDYGYVYPSHKSTLQSVRQHKYANFLENVGNSDITALVNFQALRDSLRYVDCEI---STQREFLYLFGIKERTQALMENASDEQKNRIFSEFLRLT----ENMGTLFKAILIHHS |
| 1ZKD Chain:A ((27-354)) | MELCLGHPEHGYYVTR--------FTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFDVLPIHQAIKRETGWHERVIEIGASGE----------------------------------LVFGVAADPIPGFE------------------------ALLPPLA-------RLSPPGAVFEWRPDTE--ILKIASRVRDQGGAALIIDYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAKATPQVSEDIAGALQRLTGEGRGAMGSMFKVIGVSDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9494 for 2288 contacts (4.1/contact) +
2D Compatibility (PS) -30170 + (NN) 8491 + (LL) 3584
1D Compatibility (HY) 19600 + (ID) 900
Total energy: 10099.0 ( 4.41 by residue)
QMean score : 0.035
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