Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPQLDVSTFFSQVFWFLIFFSLLFFVVRYLFLPKLDGIINTRSKRALDSFNSSICLLRLIENQTVKYNTALNQAEIQVKRVIDDALIQVEKMKANVKNILEEEDKKISKFIEEGVAKFKSEYTDELKQMTTNIALIYYNKLTNSEIKKEFVANLVSKEF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 4NFU Chain:A ((15-633)) | AFEALTGINGDLITRSWSASKQAYLTERYHKEEAGAVVIFAFQPSFSEKDFFDPDNKSSFGEIKLNRVQFPCMRKIGKGDVATVNEAFLKNLEAVIDPRTSFQASVEMAVRSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVTRFDIVPRITLARKASVEETLPHVLAQLDPRNSSVQESEQRITEFYTSVMRDTSTVANQAVCELTGSAEAILETLSSFLELSPYRPAGTFVFSTEKRLVAVNNSDAILQMLFYTCQASD------EQEWSLIPFRSIRDHHSYEELVQSMGMKLFNHLDGENSI-ESSLNDLGVSTRGRQYVQAALEEEKKRVENQKKIIQVIQQERFLKKLAWIEDEYKPKCQAHKNGYYDSFKVSNEENDFKANVKRAELAGVFDEVLGLLKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHHILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKGKPYEEVEVRVKTLEGMLREWITAGEVDEKEIFLEGSTFRKWWITLPKNHKSHSPLRDYMMDEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42505 for 906 contacts (-46.9/contact) +
2D Compatibility (PS) -15610 + (NN) -3503 + (LL) 788
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -61730.0 ( -68.13 by residue)
QMean score : 0.245
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