Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQDEIRLIIDELIRIIPFEGISDKTLLKVCTDLNLANSF--CKFQNGIYSALECIVEDLNSSMEAELRNFNLEDMKVQEQIKLAVQICLSNYATLPNYREFLKNILSFSVLPKN-IYFSSK-------LLCRIVDMIWYGIH-DQSTDFNYYTKRAILAGVYLSIILFFINDYSEGFADTLSFLDRCINNVMTFQKFKIHLKEIVGSFL
3C07 Chain:A ((40-226))
--EQTRALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNAYYYFAGK-EHLIQGFYDRIAAEHRAAVREVLARETDLEARLAGVLKVWLDIATP---YHEFAVQFFKNAADPDSPLSPFSPESEHARVEAIGIHRAVLAGAKTKVPEELRDILPE-LMWLSQMGLVLYWIFDRTEGRERSYRLAERGARLTARGVVLARFRVLRPLVRE
General information:
TITO was launched using:
RESULT:
Template:
3C07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143944 for 1227 contacts (-117.3/contact) +
2D Compatibility (PS) -18254 + (NN) -8329 + (LL) 616
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -175011.0 ( -142.63 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3C07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C07-query.scw
PDB file :
Tito_Scwrl_3C07.pdb
: