Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNSKDISSKKLTLQGFSKLKLDFNLSSSASPSMGATIVKKRRRKTHDTEEQDENKLLGSLTKKEQISRINAVQNAALLKERNLKEKEAIVKKDSIVKEDSNEKTNDRDSATNTSFKETGKEVLNDVSLVELIENNTDNEDNNKKSLKTNKDIYSKHSKRIIAQSIDDKIEQPSVFKQRFGIRNRKSEFTKGKNISREVIIPDEITIKELSIRMAEDSKSVLKMLKEEMGENYGVD-GLVDPEVACEIVEKFNHTAKRVSGANKEKNLFFIEERESLPKKPKPPIVTFMGHVDHGKTSLLDAFRESNVAERELGGITQHIGAYQIITKDKKITFIDTPGHEAFTAMRACGANITNIVVIVVAADDGVMKQTIEAMNHAKAANVSIIVAINKIDRSQSGDVERIISSLPQYDLIPEELGGDVIVVPVSAKKKINLDKLEEAILLIAELMKLEAIEDCRALGWVIESKIDKAKGISATLIVEEGTLKVGDMLVVGTAYGKVRSMVNHLGQREKVALPSSPIEITGLNGIPNAGDKFVVVSSEKQAREIAEYRLELIKEKKEDL------SNNNLDMFSRNDS-EVEELSVVLKCDVTGSIEAISNSIDKLGKDQVKLNILHKAVGGITDSDVLLAEASSAVILAFNVKVDSKIRDLAKRKGVEIHTYSIIYELIDDMRMYLTKMLKPVTREVRIGSASVRQIFNVSRVGNIIGCYVSDGVVKKDSLIKVMRNNKLIYEGKLKALRRFKDNVKEVGTNFECGVSLDGNVDIKVGDILEAHQLVQEERVL
3J4J Chain:A ((3-568))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVRIYQLAKELGMETQELLELLDQ-MGVAYKSHASTLEEKDAEAVRELVKE-QR----GLQEKL---AEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQ-ADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDADGNQRKEAGPGSAVQVLGFQELPHAGDVVEWVPDLEAAKEIAEERKEERKAREEEEKARAPATMA--ALLAAMAEEGAKELNLILRADTQGSLEAIQHILARATTEDVKINILAAQVGAPTESDVLLAQTANAAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGAREPQYKEEVLGQAEVRAIFRLPTGKQVAGCMVTQGRIPRNAEVRVLRDGQVIWQGRIASLKRFKEDVREVAQGYECGIGLDGFDDFREGDVIEAFQMVEV----


General information:
TITO was launched using:
RESULT:

Template: 3J4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -250378 for 4188 contacts (-59.8/contact) +
2D Compatibility (PS) -61473 + (NN) -23101 + (LL) 13068
1D Compatibility (HY) -39200 + (ID) 11300
Total energy: -372384.0 ( -88.92 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_3J4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J4J-query.scw
PDB file : Tito_Scwrl_3J4J.pdb: