Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MLKNSPNGEIETPLDLIVKSCLEGITQDKQEVLIKLLEHKNLYFSQIKSTPPIELNVQL-KQIIELAIIERLTDAISRKI---
4HQE Chain:A ((4-108))
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDL
General information:
TITO was launched using:
RESULT:
Template:
4HQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20358 for 474 contacts (-42.9/contact) +
2D Compatibility (PS) -8520 + (NN) -6328 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -37956.0 ( -80.08 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_4HQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQE-query.scw
PDB file :
Tito_Scwrl_4HQE.pdb
: